CDS

Accession Number TCMCG065C13638
gbkey CDS
Protein Id XP_004964920.1
Location join(6801038..6801401,6802925..6803160,6803249..6803392,6803468..6803629,6804911..6804994,6805481..6805551,6805621..6805978,6806084..6806239,6806337..6806434,6806517..6806565,6806635..6806787,6806885..6807028,6807106..6807205,6807336..6807503,6807577..6807625,6807702..6807793,6808194..6808263,6808474..6808528,6808633..6808741,6808850..6808993,6809088..6809185,6809275..6809517)
Gene LOC101784024
GeneID 101784024
Organism Setaria italica

Protein

Length 1048aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA207554
db_source XM_004964863.3
Definition putative transcription elongation factor SPT5 homolog 1 [Setaria italica]

EGGNOG-MAPPER Annotation

COG_category K
Description Transcription elongation factor SPT5
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
ko03021        [VIEW IN KEGG]
KEGG_ko ko:K15172        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006351        [VIEW IN EMBL-EBI]
GO:0006354        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006357        [VIEW IN EMBL-EBI]
GO:0006366        [VIEW IN EMBL-EBI]
GO:0006368        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008023        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032044        [VIEW IN EMBL-EBI]
GO:0032774        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097659        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCTCGCCGCGGCCGCGACGACGACGACGACGAGGTGGAGGAGGAGGAGGACGAGGAGGAGGCCTACGACCTGGACGACGAGGAGGAGGATGAGGAGGAAGACTACGAGGAGGAGGCGAGGCGCGGGAAGGCCTCCCGCGGCGGCGGCGGCGGCAAGGCCGGCGGCGGCGGGCGGAAGCGGTCGCGCGAGGACAACTTCATCGACGACTCGGCCATCGAGGACGAGGATGAGGATGATGAGGACGACGACGGCGGCGCGAGGCCGAGGAAGAAGGGAGGCGGCGGGGTGCGAGGGTTCTTCGATGAGGAGGCCCAGGTTGACGAGGACGAGGAGGAGGAGGAGGAGGGCGAGGGCGAGGACGATTTTATCAATGATGCTGGGGCCGATATTCCTGACGAGGATGTTGTTAGGGTCGCAAGACGTCATTCTATGCCTATGAGGGATGAAGATGAGGACATTGATGAGATTGAGAGACAAGTACGGGAGAGATATGCAAGATCCACTCATATTGAGTATGGTGAAGAAGCTGCAGAAGTGGAACAGCAAGCTTTATTGCCCTCCGTGAAGGATCCTAAACTATGGATGGTCAAATGTGCGATTGGACATGAGAGAGAGACCGCGATTTGTCTGATGCAAAAGTACATTGATAGGTCAGATCTTCAGATAAAGTCTGTCGTGGCGTTGGATCATCTAAAAAATTATATTTATGTTGAAGCAGAAAAGGAAGCCCATGTCAAAGAGGCTTGTAAAGGTCTACGAAATATTTATGCTTCAGCAAAAATAACATTAGTTCCAATAAAAGAAATGGCAGATGTCCTCTCTGTTGAGAGCAAATCTGTTGATCTTTCACGGGATTCTTGGGTCCGAATGAAGTTGGGCATATACAAAGGTGACCTTGCTAAGGTTGTTGATGTTGACAATGTACGCCAAAGAGTAGATGTAAAGCTGATCCCTAGAGTAGACCTACAAGCTCTGGCTAGTAAACTGGAAGGGAGAGAGGCTGTAAAGAAGAAAGCATTTGTCCCACCACCTCGATTCTTCAATATCGATGAGGCGAGGGAGATGCACATTCGAGTGGAACGGAGGCGGGATAAAGAATCTGGGGAGTACTTTGAGTGGGTTGATAATCTGAAGTTCAAAGATGGTTTCTTGTACAAATCAGTCTCCACTAAATCAATCCACACAAATAATATTCAGCCGACATTCGATGAACTTGAGAAATTTAGGAAGCCTGGTGATGACATGAATGGCGACGTGGCTAGCTTGTCCACTCTTTTTGCAAACAGGAAAAAAGGACACTTCATGAAGGGTGATGCCGTCATAGTTATTAAAGGCGATTTGAAAAATCTGGAGGGGTGGGTTGAGAAAGTAGAGGATGAAACAGTTCACATCAGGCCAAAAATATCTGATCTTCCGAAAACATTAGCCTTCAACGAGAAGGAGCTTTGCAAATATTTCAAACCTGGTGACCATGTCAAGGTGATCTCAGGTGTTCAAGAAGGAGCTACTGGCATGGTTGTTAAAGTGGAAGGACATGTCTTGATCATTTTGTCTGACACAACTAAAGAACATATCCGCGTGTTTGCCGATCATGTTGTCGAAAGCTCTGAAATTACCACAGGAATTACCAGAATTGGTGATTATGAACTGCATGATCTTGTCCTTTTGGACAATTTGTCATTTGGGGTAATTATAAGGGTGGAAGCTGAAGCATTTCAGGTTCTGAAAGGAGTGCCAGATAGACCTGAAGTTGTACTTGTGAAATTAAGAGAAATAAAAAGCAAAATTGATCGGCGTGCTTCAGCGAAAGATAGGTCAAATAATATTATCTCAGCAAAGGATGTTGTAAGGGTTGTTGAAGGAGCATGCAAGGGGAAGCAAGGACCTGTGGAACACATACACAAGGGGATACTGTTTATCTATGACAGGCATCACCTTGAACATGCAGGCTTTATTTGTGCAAAAGCACAATCTTGCCTTCTTGTTGGTGGATCGACTGGTGGCCGTCGAGGAAATGGCATGGACACAGCAGATGCACGGCTTGGTGCTTTGAGGTCTCCAGCAAGCATTTTGCAATCTCCAGGAAGACTGCCCCCAAGAGGACCTCACATGAATTTTGGTGGAAGGTTTGGAGGTGGTCGTGGTGGTAGAGGGCATGATGCCTTGGTGGGTAAATGTATCAAAATTAAGTCTGGTCCTTACAAGGGGTACCGCGGCCGTGTCAAAGAGGTGACTGGTGCACTTGTACGTGTGGAACTTGATTCGTTGATGAAGATTGTCACAGTTAAAAGAGATGATATTGCTGACACACCTACTGTTGCGACACCATTCCGTGAACCTCGATATTCATTGGGTGGTGAAACACCGATGCACCCGTCTCGAACACCACACCATGCTTATCAGACTCCAATGCGGGACCCTGGAGCAACACCAATACACGATGGGATGCGGACTCCTATGCGTAGTCGAGCCTGGGCTCCTATGAGTCCTCCGAGGGATAATTGGGAAGATGGAAATCCTGCTACTTGGGGCAGCAGTCCAGCCTACCAGCCAGGAACTCCACCAGCTCGGCCATACGAAGCCCCTACACCAGGATCAGGGTGGGCAAACACTCCAGGAGTTAGTTTCAATGATGCTCCAACTCCTAGAGAGAACTATGCAAATGCTCCGAGTCCATACGTGCCTTCCACACCTGTTGGTCAACCGATGACTCCAAATTCTGCTGCGTATCTTCCGGGTACTCCTGGTGGTCAGCCAATGACTCCAGGCAATGTGGGAATGGATATAATGTCCCCCATAATAGGTGGTGAGGGTGAAGGTACATGGCTGTTGCCAGATGTTTTGGTCAATGTGTTGAGGGGAGGCGACGATGGTCCCGGTGTCGTCAGGGAAGTACTTGGGGACGGATCTTGCCGAGTTGCACTTGGGTCGTCAGGCAACGGCGACATGGTGACTGTCCTTCCGAACGAGCTCGAGGTCATCAGGCCAAAGAAGAGCGACAGGATCAAGATACTGAATGGCAATTTCCGCGGGTACACAGGAAAACTCATAGGCATAGATGGTTCTGACGGAATAGTGAAGCTGGACGACACATACGAAGTTAAGATATTAGATATGGTGATTTTGGCCAAACTGGCGACTTGA
Protein:  
MARRGRDDDDDEVEEEEDEEEAYDLDDEEEDEEEDYEEEARRGKASRGGGGGKAGGGGRKRSREDNFIDDSAIEDEDEDDEDDDGGARPRKKGGGGVRGFFDEEAQVDEDEEEEEEGEGEDDFINDAGADIPDEDVVRVARRHSMPMRDEDEDIDEIERQVRERYARSTHIEYGEEAAEVEQQALLPSVKDPKLWMVKCAIGHERETAICLMQKYIDRSDLQIKSVVALDHLKNYIYVEAEKEAHVKEACKGLRNIYASAKITLVPIKEMADVLSVESKSVDLSRDSWVRMKLGIYKGDLAKVVDVDNVRQRVDVKLIPRVDLQALASKLEGREAVKKKAFVPPPRFFNIDEAREMHIRVERRRDKESGEYFEWVDNLKFKDGFLYKSVSTKSIHTNNIQPTFDELEKFRKPGDDMNGDVASLSTLFANRKKGHFMKGDAVIVIKGDLKNLEGWVEKVEDETVHIRPKISDLPKTLAFNEKELCKYFKPGDHVKVISGVQEGATGMVVKVEGHVLIILSDTTKEHIRVFADHVVESSEITTGITRIGDYELHDLVLLDNLSFGVIIRVEAEAFQVLKGVPDRPEVVLVKLREIKSKIDRRASAKDRSNNIISAKDVVRVVEGACKGKQGPVEHIHKGILFIYDRHHLEHAGFICAKAQSCLLVGGSTGGRRGNGMDTADARLGALRSPASILQSPGRLPPRGPHMNFGGRFGGGRGGRGHDALVGKCIKIKSGPYKGYRGRVKEVTGALVRVELDSLMKIVTVKRDDIADTPTVATPFREPRYSLGGETPMHPSRTPHHAYQTPMRDPGATPIHDGMRTPMRSRAWAPMSPPRDNWEDGNPATWGSSPAYQPGTPPARPYEAPTPGSGWANTPGVSFNDAPTPRENYANAPSPYVPSTPVGQPMTPNSAAYLPGTPGGQPMTPGNVGMDIMSPIIGGEGEGTWLLPDVLVNVLRGGDDGPGVVREVLGDGSCRVALGSSGNGDMVTVLPNELEVIRPKKSDRIKILNGNFRGYTGKLIGIDGSDGIVKLDDTYEVKILDMVILAKLAT